University of Illinois at Urbana-Champaign

ITG Technical Reports 

Highly detailed reports dealing with a variety of subjects, ITG Technical Reports enable users of the lab and of ITG software to get a wealth of information about a topic immediately online. (Printed versions of the Technical Reports are also available in the VMIL and Microscopy Suite paper racks, or via postal mail.) 

Technical reports may be obtained in printed form by sending an email to techreports@itg.uiuc.edu. Please include the title, number, and quantity of technical reports desired, along with your name, mailing address, and email address. Or, you can write to: Beckman ITG Technical Reports, Beckman Institute, 405 N. Mathews, Urbana, IL 61801


2004

04-001 Technology Vendors Guide
04-002 Color Management: Building Monitor and Output Profiles

 


2003

03-001 Research Grade Remote-Access Scanning Electron Microscopy: The Evolution of the Bugscope Project (Submitted to Microscopy and Microanalysis 2003)
03-002 Constructing a Research Grade Interactive Remote Microscopy Application - Goals, Challenges, and Results (Submitted to Microscopy and Microanalysis 2003)
03-003 Printing 3D Models to the Genisys Xs 3D Printer
03-004 How the ESEM Works
03-005 Volumetric and Surface Data Fabrication Workflow for the ZCorp Z406 3D Rapid Prototyping System (In Press)

 


2002

02-001 Integrating Remote Scientific Instrumentation in the Curriculum to Support Inquiry: Case Studies in K-12 and Teacher Education (Submitted to SITE 2002, Nashville, TN)
02-002 irma--An Interactive Remote Microscopy Application for WWW-Based Control of an Environmental Scanning Electron Microscope (ESEM)
02-003 Inserting a Flash Animation into PowerPoint (Replaces Technical Report 01-013)
02-004 Creating a DXF File from a List of Vertices
02-005 Live Streaming Video Options for Bugscope
02-006 Converting Cyberscanner Data into Various 3D File Formats

 


2001

01-001 An XML Language Template Design for Managing a Remote Instrument Educational Outreach Project (Submitted to Microscopy and Microanalysis 2001 on 2/15/01)
01-002 Automated Very Low Magnification Imaging for TEM (Submitted to Microscopy and Microanalysis 2001 on 2/15/01)
01-003 Automation for Cryo-TEM:  From Specimen Grid to 3D Map (Submitted to Microscopy and Microanalysis 2001 on 2/15/01)
01-004 Application of a SQL Database for Automated Image Acquisition and Analysis for CryoEM (Submitted to Microscopy and Microanalysis 2001 on 2/15/01)
01-005 Automated Filament Finding and Selection from Cryo Electron Micrographs (Submitted to Microscopy and Microanalysis 2001 on 2/15/01)
01-006 Exhibition Proposal for Image and Meaning 2001: Live Demonstration of irma (Interactive Remote Microscopy Application) (Submitted to Imaging and Meaning 2001 Conference)
01-007 Converting Animations to Quicktime Movies Using Maya Fusion Lite
01-008 Top2maya - A Tool for Converting 2D Topographical Maps to 3D Models (Replaces Technical Report 00-016)
01-009 Physical Data Visualization and Rapid Prototyping with the Genisys Xs
01-010 Detection of Filamentous Structures in Low-Contrast Images Acquired in Defocus Pair by Cryo-Electron Microscopy (Submitted to IEEE Computer Society Conf. Computer Vision and Pattern Recognition, Hawaii)
01-011 A Database for Leginon:  An Interactive User Interface for Automated Acquisition of Transmission Electron Micrographs
01-012 Automated Identification of Filaments in Cryo-electron Microscopy Images.  (Submitted to Journal of Structural Biology)
01-013 Inserting a Flash Animation Into Microsoft PowerPoint
01-014 MRC3DLL (To download the zipped file, click here)
01-015 MRC3DLL Extension (To download the zipped file, click here)
01-016 MolSlicer - A Tool for Removing Sections of mol2mel Molecules (Updated May 6, 2002)
01-017 Scanning Slides using the Nikon LS-2000
01-018 Annual Report

 


 

2000

00-001 An Interactive User Interface for Automated Acquisition of Transmission Electron Micrographs
00-002 An Automated System for Maintaining Liquid Nitrogen Levels in the Gatan Cryostage
00-003 An Integrated System for Transmission Electron Microscopy
00-004 Bugscope: The Second Year of a Sustainable Remote Microscope Project for K-12 Education Outreach
00-005 Imaging Electrochemical Controlled Chemical Gradients Using Pulsed Force Mode Atomic Force Microscopy.
00-006 Imaging Ultrathin Organic Films on the Nanometer Level Using Surface Plasmons.
00-007 Annual Report
00-008 Formative Evaluation of Bugscope: A Sustainable World Wide Laboratory for K-12.
00-009 Evenly Dispersed Gold Beads on TEM Grids.
00-010 Leginon: An automated system for acquisition of images from vitreous ice specimens 
00-011 mol2mel – A Tool for Converting Molecular Data from Cerius2 to Maya.
00-012 Bugscope: A Practical Approach to Providing Remote Microscopy for Science Education Outreach
00-013 Perceptual Organization as a Method for Detection and Selection of Filamentous Structures in Highly Noisy Images Acquired by Cryo-electron Microscopy (Submitted to The International Conference for Computer Vision 2001)
00-014 Quick Start Guide to Using Final Cut Pro in the VMIL
00-015 A QuickStart guide to printing a 3D model starting from a block of bytes
00-016 Top2maya - A Tool for Converting 2D Topographical Maps to 3D Models
00-017 Annual Report

1999

99-001 Improving the Positional Accuracy of the Goniometer on the Philips CM200 TEM.
99-002 Automated Acquisition of Cryo Electron Micrographs Using Leginon.
99-003 Bugscope: Sustainable Internet Access to a ESEM for the K-12 Classroom.
99-004 Nondestructive Imaging of Pin-Mounted Museum Specimens of Insects Using the Environmental Scanning Electron Microscope (ESEM).
99-005 Importing Surfaces from AnalyzeAVW into Softimage.
99-006 Cell Biological Applications of Fluorescence Microscopy.
99-007 irma: An Interactive Remote Microscopy Application for WWW-Based Control of an Environmental Scanning Electron Microscope (ESEM).
99-008 SLA Model Manufacture of an Analyze Generated Surface.
99-009 A Web Atlas of Cellular Structures Using Light and Confocal Microscopy
99-010 Improving the Positional Accuracy of the Goniometer on the Philips CM SERIES TEM.
99-011 CVS: Concurrent Versioning System.

1998

98-001 The World Wide Laboratory EM Control Library: Application Programming Interface Specification v0.5.
98-002 A Testbed for Automated Acquisition from a TEM.
98-003 A Testbed for Automated Acquisition from a TEM.
98-004 Quantitative Densitometry with the Umax Flatbed Scanner.
98-005 Constructing and Rendering 3D Surfaces from from Topographical and Intensity Data using Softimage 3D.
98-006 Quantitative Densitometry with the Leaf Scanner.
98-007 16-Bit Quantitative Optical Densitometry with the Leaf Scanner and AIS.
98-008 Leginon: A System for Fully Automated Acquisition of 1000 Electron Micrographs a Day.
98-009 Preparation of Catalase Crystals.
98-010 The World Wide Laboratory: Remote and Automated Access to Imaging Instrumentation.
98-011 JavaScope: A Web-Based TEM Control Interface.
98-012 TEM Length Calibrations.